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MGYG_08461 swiss cheese [ Nannizzia gypsea CBS 118893 ]

Gene ID: 10024787, updated on 17-May-2024

Summary

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Gene symbol
MGYG_08461
Gene description
swiss cheese
Primary source
FungiDB:MGYG_08461
Locus tag
MGYG_08461
See related
VEuPathDB:MGYG_08461
Gene type
protein coding
RNA name
swiss cheese
RefSeq status
PROVISIONAL
Organism
Nannizzia gypsea CBS 118893 (strain: CBS 118893)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Arthrodermataceae; Nannizzia
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Genomic context

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See MGYG_08461 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_003345193.1Genomic Context describing neighboring genes Neighboring gene viral A-type inclusion protein repeat protein Neighboring gene hypothetical protein Neighboring gene sarcosine oxidase Neighboring gene DUF323 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003345193.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
swiss cheese

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003345193.1 Reference assembly

    Range
    580586..585131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003169508.1 → XP_003169556.1  swiss cheese [Nannizzia gypsea CBS 118893]

    See identical proteins and their annotated locations for XP_003169556.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E4V5S4
    Conserved Domains (4) summary
    COG0664
    Location:817 → 941
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:1196 → 1470
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:817 → 924
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cl11396
    Location:1177 → 1445
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
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