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SLC24A1 solute carrier family 24 member 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100232202, updated on 8-Mar-2024

Summary

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Gene symbol
SLC24A1
Gene description
solute carrier family 24 member 1
See related
Ensembl:ENSTGUG00000009206
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See SLC24A1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 10 NC_044222.2 (18249239..18265975)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 10 NC_045009.1 (18157122..18171374)

Chromosome 10 - NC_044222.2Genomic Context describing neighboring genes Neighboring gene 3-hydroxyacyl-CoA dehydratase 3 Neighboring gene integrator complex subunit 14 Neighboring gene DENN domain containing 4A Neighboring gene transfer RNA glutamine (anticodon CUG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium, potassium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic depression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium/calcium exchanger 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044222.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    18249239..18265975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041718411.1 → XP_041574345.1  sodium/potassium/calcium exchanger 1 isoform X1

    UniProtKB/TrEMBL
    H0ZFY3
    Conserved Domains (1) summary
    TIGR00927
    Location:51 → 662
    2A1904; K+-dependent Na+/Ca+ exchanger

  2. XM_041718413.1 → XP_041574347.1  sodium/potassium/calcium exchanger 1 isoform X3

    UniProtKB/TrEMBL
    H0ZFY3
    Conserved Domains (1) summary
    TIGR00927
    Location:51 → 602
    2A1904; K+-dependent Na+/Ca+ exchanger

  3. XM_041718412.1 → XP_041574346.1  sodium/potassium/calcium exchanger 1 isoform X2

    UniProtKB/TrEMBL
    H0ZFY3
    Conserved Domains (1) summary
    TIGR00927
    Location:51 → 634
    2A1904; K+-dependent Na+/Ca+ exchanger
Nucleotide Protein
Heading Accession and Version

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