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SUMF1 sulfatase modifying factor 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100231956, updated on 13-Aug-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 12 NC_044224.2 (1388917..1413208)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 12 NC_045011.1 (1332567..1357086)

Chromosome 12 - NC_044224.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121470613 Neighboring gene basic helix-loop-helix family member e40 Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene uncharacterized LOC116808879 Neighboring gene leucine rich repeat neuronal 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formylglycine-generating enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044224.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    1388917..1413208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032750617.2 → XP_032606508.2  formylglycine-generating enzyme isoform X2

    Conserved Domains (1) summary
    COG1262
    Location:68 → 289
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_030282982.3 → XP_030138842.3  formylglycine-generating enzyme isoform X1

    UniProtKB/TrEMBL
    H0ZIZ0
    Conserved Domains (1) summary
    COG1262
    Location:68 → 345
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

  3. XM_032750618.2 → XP_032606509.2  formylglycine-generating enzyme isoform X3

    Conserved Domains (1) summary
    COG1262
    Location:68 → 289
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

  4. XM_032750619.2 → XP_032606510.2  formylglycine-generating enzyme isoform X4

    Conserved Domains (1) summary
    COG1262
    Location:68 → 289
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005981709.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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