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CDH7 cadherin 7 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100229701, updated on 13-Aug-2024

Summary

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Gene symbol
CDH7
Gene description
cadherin 7
See related
Ensembl:ENSTGUG00000009395
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 2 NC_044213.2 (97166933..97251336, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 2 NC_045000.1 (98889792..98973964, complement)

Chromosome 2 - NC_044213.2Genomic Context describing neighboring genes Neighboring gene cadherin 19 Neighboring gene uncharacterized LOC115493836 Neighboring gene uncharacterized LOC121469378 Neighboring gene uncharacterized LOC116807855

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044213.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    97166933..97251336 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002187051.5 → XP_002187087.3  cadherin-7

    UniProtKB/TrEMBL
    A0A674GEP5, A0A674GM13
    Conserved Domains (2) summary
    cd11304
    Location:157 → 258
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:73 → 151
    CA; Cadherin repeats
Nucleotide Protein
Heading Accession and Version

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