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DES desmin [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100220724, updated on 8-Mar-2024

Summary

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Gene symbol
DES
Gene description
desmin
See related
Ensembl:ENSTGUG00000006062
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See DES in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 7 NC_044219.2 (10328558..10333958)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 7 NC_045006.1 (10274822..10280220)

Chromosome 7 - NC_044219.2Genomic Context describing neighboring genes Neighboring gene microRNA mir-153-2 Neighboring gene protein tyrosine phosphatase receptor type N Neighboring gene microRNA mir-2965 Neighboring gene aspartyl aminopeptidase Neighboring gene striated muscle enriched protein kinase Neighboring gene GDP-mannose pyrophosphorylase A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in skeletal muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
desmin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044219.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    10328558..10333958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002196033.6 → XP_002196069.2  desmin

    UniProtKB/TrEMBL
    H0Z6P9
    Related
    ENSTGUP00000006248.2
    Conserved Domains (2) summary
    pfam00038
    Location:98 → 406
    Filament; Intermediate filament protein
    pfam04732
    Location:42 → 97
    Filament_head; Intermediate filament head (DNA binding) region
Nucleotide Protein
Heading Accession and Version

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