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CCBE1 collagen and calcium binding EGF domains 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100217551, updated on 13-Aug-2024

Summary

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Gene symbol
CCBE1
Gene description
collagen and calcium binding EGF domains 1
See related
Ensembl:ENSTGUG00000001894
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) Z NC_044241.2 (42623688..42721440, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) Z NC_045027.1 (45059108..45156443, complement)

Chromosome Z - NC_044241.2Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 39 Neighboring gene mitochondrial ribosomal protein L17 Neighboring gene phorbol-12-myristate-13-acetate-induced protein 1 Neighboring gene PDZ domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen and calcium-binding EGF domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044241.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    42623688..42721440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002191188.5 → XP_002191224.3  collagen and calcium-binding EGF domain-containing protein 1

    Conserved Domains (1) summary
    smart00179
    Location:255 → 296
    EGF_CA; Calcium-binding EGF-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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