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LOC100206393 triosephosphate isomerase [ Hydra vulgaris (swiftwater hydra) ]

Gene ID: 100206393, updated on 27-Jun-2024

Summary

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Gene symbol
LOC100206393
Gene description
triosephosphate isomerase
See related
EnsemblRapid:LOC100206393
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydra vulgaris
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra
Also known as
TPI1
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Genomic context

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See LOC100206393 in Genome Data Viewer
Location:
chromosome: 09
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current HydraT2T_105 (GCF_037890685.1) 09 NC_088972.1 (12877024..12877838)
RS_2024_06 current HydraT2T_AEP (GCF_038396675.1) 09 NC_088928.1 (14277641..14278891)
103 previous assembly Hydra_105_v3 (GCF_022113875.1) 5 NC_061160.1 (12394665..12395544)

Chromosome 09 - NC_088972.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136095009 Neighboring gene uncharacterized LOC105848240 Neighboring gene uncharacterized LOC136095289 Neighboring gene phosphatidylinositol-glycan biosynthesis class F protein Neighboring gene potassium voltage-gated channel subfamily D member 3 Neighboring gene RAB6-interacting golgin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Punctuated emergences of genetic and phenotypic innovations in eumetazoan, bilaterian, euteleostome, and hominidae ancestors. Wenger Y, et al. Genome Biol Evol, 2013. PMID 24065732, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triose-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triosephosphate isomerase
Names
Hydra vulgaris Triosephosphate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037890685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HydraT2T_105 Primary Assembly

Genomic

  1. NC_088972.1 Reference HydraT2T_105 Primary Assembly

    Range
    12877024..12877838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002167575.5 → XP_002167611.1  triosephosphate isomerase

    UniProtKB/TrEMBL
    T2MEH2
    Related
    XP_002167611.1
    Conserved Domains (1) summary
    PTZ00333
    Location:1 → 249
    PTZ00333; triosephosphate isomerase; Provisional

Alternate HydraT2T_AEP

Genomic

  1. NC_088928.1 Alternate HydraT2T_AEP

    Range
    14277641..14278891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065804799.1 → XP_065660871.1  triosephosphate isomerase

Nucleotide Protein
Heading Accession and Version

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