U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cdo1 cysteine dioxygenase type 1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100196492, updated on 30-Nov-2023

Summary

Gene symbol
cdo1
Gene description
cysteine dioxygenase type 1
See related
Ensembl:ENSSSAG00000045718
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: ssa24
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa24 NC_059465.1 (36994894..37000448)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa24 NC_027323.1 (39487614..39493435, complement)

Chromosome ssa24 - NC_059465.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 10 Neighboring gene adaptor related protein complex 3 subunit sigma 1 Neighboring gene protein fem-1 homolog C Neighboring gene transmembrane p24 trafficking protein 7

Genomic regions, transcripts, and products

General protein information

Preferred Names
cysteine dioxygenase type 1
Names
cysteine dioxygenase, type I
NP_001134993.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001141521.2NP_001134993.1  cysteine dioxygenase type 1

    See identical proteins and their annotated locations for NP_001134993.1

    Status: PROVISIONAL

    Source sequence(s)
    BT049966
    UniProtKB/TrEMBL
    B5XFZ7
    Related
    ENSSSAP00000042778.1, ENSSSAT00000069302.2
    Conserved Domains (1) summary
    pfam05995
    Location:1173
    CDO_I; Cysteine dioxygenase type I

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059465.1 Reference Ssal_v3.1

    Range
    36994894..37000448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)