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LOC100196455 THO complex 7 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100196455, updated on 30-Nov-2023

Summary

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Gene symbol
LOC100196455
Gene description
THO complex 7
See related
Ensembl:ENSSSAG00000069963
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: ssa22
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa22 NC_059463.1 (20157926..20163904)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa22 NC_027321.1 (19505533..19511505)

Chromosome ssa22 - NC_059463.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome non-ATPase regulatory subunit 6 Neighboring gene ataxin-7-like Neighboring gene uncharacterized LOC106583023 Neighboring gene uncharacterized LOC106582952

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 7 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001141484.1 → NP_001134956.1  THO complex subunit 7 homolog

    See identical proteins and their annotated locations for NP_001134956.1

    Status: PROVISIONAL

    Source sequence(s)
    BT049832
    UniProtKB/TrEMBL
    B5XFL3
    Related
    ENSSSAP00000087970.1, ENSSSAT00000121957.2
    Conserved Domains (1) summary
    pfam05615
    Location:7 → 137
    THOC7; Tho complex subunit 7

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059463.1 Reference Ssal_v3.1

    Range
    20157926..20163904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases