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ret1 receptor tyrosine kinase [ Salmo salar (Atlantic salmon) ]

Gene ID: 100196451, updated on 30-Nov-2023

Summary

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Gene symbol
ret1
Gene description
receptor tyrosine kinase
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: ssa05
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa05 NC_059446.1 (71909352..71912538)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa02 NC_027301.1 (10141377..10144576)

Chromosome ssa05 - NC_059446.1Genomic Context describing neighboring genes Neighboring gene chromodomain-helicase-DNA-binding protein 4 Neighboring gene tyrosine-protein phosphatase non-receptor type 6 Neighboring gene tumor necrosis factor receptor superfamily member 5 Neighboring gene mannan-binding lectin serine protease 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proto-oncogene tyrosine-protein kinase receptor Ret
Names
Retinol-binding protein I, cellular
NP_001134952.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001141480.2 → NP_001134952.1  proto-oncogene tyrosine-protein kinase receptor Ret

    See identical proteins and their annotated locations for NP_001134952.1

    Status: PROVISIONAL

    Source sequence(s)
    BT049820
    UniProtKB/TrEMBL
    B5XB46, B5XFK1
    Conserved Domains (1) summary
    cl10502
    Location:5 → 136
    lipocalin_FABP; lipocalin/cytosolic fatty acid-binding protein family

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059446.1 Reference Ssal_v3.1

    Range
    71909352..71912538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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