U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

bclx Apoptosis regulator Bcl-X [ Salmo salar (Atlantic salmon) ]

Gene ID: 100196057, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
bclx
Gene description
Apoptosis regulator Bcl-X
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See bclx in Genome Data Viewer
Location:
chromosome: ssa13
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa13 NC_059454.1 (12113919..12149870, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa13 NC_027312.1 (8034714..8061988, complement)

Chromosome ssa13 - NC_059454.1Genomic Context describing neighboring genes Neighboring gene protein FAM110A-like Neighboring gene cytochrome c oxidase subunit 4 isoform 2, mitochondrial Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 2-like Neighboring gene partitioning defective 6 homolog beta-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extrinsic apoptotic signaling pathway in absence of ligand IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intrinsic apoptotic signaling pathway in response to DNA damage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Apoptosis regulator Bcl-X; apoptosis regulator Bcl-X

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001141086.1 → NP_001134558.1  Apoptosis regulator Bcl-X

    See identical proteins and their annotated locations for NP_001134558.1

    Status: PROVISIONAL

    Source sequence(s)
    BT048202
    UniProtKB/TrEMBL
    B5XAY3
    Conserved Domains (1) summary
    TIGR00865
    Location:2 → 226
    bcl-2; apoptosis regulator

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059454.1 Reference Ssal_v3.1

    Range
    12113919..12149870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045692195.1 → XP_045548151.1  apoptosis regulator Bcl-X isoform X1

    UniProtKB/TrEMBL
    B5XAY3
    Conserved Domains (1) summary
    TIGR00865
    Location:2 → 226
    bcl-2; apoptosis regulator
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials