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stx10 Syntaxin-10 [ Salmo salar (Atlantic salmon) ]

Gene ID: 100195114, updated on 30-Nov-2023

Summary

Gene symbol
stx10
Gene description
Syntaxin-10
See related
Ensembl:ENSSSAG00000115303
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

See stx10 in Genome Data Viewer
Location:
chromosome: ssa12
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa12 NC_059453.1 (20791908..20813166, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa02 NC_027301.1 (67192346..67205995)

Chromosome ssa12 - NC_059453.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 1 Neighboring gene nucleus accumbens-associated protein 1-like Neighboring gene uncharacterized LOC123725453 Neighboring gene immediate early response 2

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001140143.1NP_001133615.1  Syntaxin-10

    See identical proteins and their annotated locations for NP_001133615.1

    Status: PROVISIONAL

    Source sequence(s)
    BT045313
    UniProtKB/TrEMBL
    B5X2P4
    Related
    ENSSSAP00000125945.1, ENSSSAT00000191496.1
    Conserved Domains (2) summary
    cd15851
    Location:158222
    SNARE_Syntaxin6; SNARE motif of syntaxin 6
    pfam09177
    Location:13103
    Syntaxin-6_N; Syntaxin 6, N-terminal

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059453.1 Reference Ssal_v3.1

    Range
    20791908..20813166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045690431.1XP_045546387.1  syntaxin-10 isoform X1

    Related
    ENSSSAP00000156201.1, ENSSSAT00000236631.1