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LOC100186374 26S proteasome non-ATPase regulatory subunit 11 [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100186374, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100186374
Gene description
26S proteasome non-ATPase regulatory subunit 11
See related
Ensembl:ENSCING00000009508
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100186374 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 3 NC_020168.2 (1971780..1976291, complement)

Chromosome 3 - NC_020168.2Genomic Context describing neighboring genes Neighboring gene putative mannan endo-1,6-alpha-mannosidase C1198.07c Neighboring gene uncharacterized LOC100181620 Neighboring gene uncharacterized LOC113474129 Neighboring gene 5-oxoprolinase Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020168.2 Chromosome 3 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020168.2 Reference KH Primary Assembly

    Range
    1971780..1976291 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002132020.5 → XP_002132056.1  26S proteasome non-ATPase regulatory subunit 11

    UniProtKB/TrEMBL
    A0A1W2WQG5, F7B0I1
    Related
    ENSCINP00000002021
    Conserved Domains (2) summary
    COG5159
    Location:17 → 419
    RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
    pfam01399
    Location:283 → 387
    PCI; PCI domain
Nucleotide Protein
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