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ci-vp-r vasopressin/oxytocin-related peptide receptor [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100186325, updated on 21-Dec-2023

Summary

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Gene symbol
ci-vp-r
Gene description
vasopressin/oxytocin-related peptide receptor
See related
Ensembl:ENSCING00000006620
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See ci-vp-r in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) 9 NC_020174.2 (6085127..6093045, complement)

Chromosome 9 - NC_020174.2Genomic Context describing neighboring genes Neighboring gene microRNA mir-4001g Neighboring gene dynein intermediate chain 3 Neighboring gene uncharacterized LOC100176117 Neighboring gene uncharacterized LOC100186276 Neighboring gene myosin-11 Neighboring gene syntaxin-binding protein 4-like Neighboring gene armadillo-like helical domain-containing protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020174.2 Chromosome 9 Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a novel vasopressin/oxytocin superfamily peptide and its receptor from an ascidian, Ciona intestinalis. Kawada T, et al. Peptides, 2008 Oct. PMID 18586058

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vasopressin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasopressin/oxytocin-related peptide receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135842.1 → NP_001129314.1  vasopressin/oxytocin-related peptide receptor

    See identical proteins and their annotated locations for NP_001129314.1

    Status: PROVISIONAL

    Source sequence(s)
    AB432888
    UniProtKB/TrEMBL
    A0A1W2VPT5, B5UA19, F6QP64
    Related
    ENSCINP00000013591, ENSCINT00000013591
    Conserved Domains (2) summary
    pfam00001
    Location:41 → 307
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35 → 226
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NC_020174.2 Reference KH Primary Assembly

    Range
    6085127..6093045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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