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LOC100177850 DNA polymerase beta-like [ Ciona intestinalis (vase tunicate) ]

Gene ID: 100177850, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100177850
Gene description
DNA polymerase beta-like
See related
Ensembl:ENSCING00000022190
Gene type
protein coding
RefSeq status
MODEL
Organism
Ciona intestinalis
Lineage
Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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Genomic context

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See LOC100177850 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
104 current KH (GCF_000224145.3) Unplaced Scaffold NW_004190503.2 (20307..21532, complement)

NW_004190503.2Genomic Context describing neighboring genes Neighboring gene nucleolar protein 58 Neighboring gene SPATS2-like protein Neighboring gene serine/threonine-protein phosphatase PP1-beta catalytic subunit Neighboring gene triple functional domain protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004190503 Unplaced Scaffold Reference KH Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA polymerase beta-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KH Primary Assembly

Genomic

  1. NW_004190503.2 Reference KH Primary Assembly

    Range
    20307..21532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002128426.4 → XP_002128462.1  DNA polymerase beta-like

    UniProtKB/TrEMBL
    A0A1W2WC91, H2XPD1
    Related
    ENSCINP00000031514
    Conserved Domains (2) summary
    cd00141
    Location:15 → 324
    NT_POLXc; Nucleotidyltransferase (NT) domain of family X DNA Polymerases
    smart00483
    Location:10 → 325
    POLXc; DNA polymerase X family
Nucleotide Protein
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