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EPB41L3 erythrocyte membrane protein band 4.1 like 3 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173639, updated on 6-Jun-2024

Summary

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Gene symbol
EPB41L3
Gene description
erythrocyte membrane protein band 4.1 like 3
Locus tag
CR201_G0002453
See related
Ensembl:ENSPPYG00000009024
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 17 NC_072002.2 (29439924..29689292)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 18 NC_072003.1 (9812180..10060719)

Chromosome 17 - NC_072002.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 200C Neighboring gene uncharacterized LOC129051508 Neighboring gene uncharacterized LOC129051509 Neighboring gene uncharacterized LOC134760286 Neighboring gene uncharacterized LOC103892944 Neighboring gene zinc finger and BTB domain containing 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp459E117, DKFZp459B0627, DKFZp469E0823

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cortical actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
band 4.1-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001133169.1 → NP_001126641.1  band 4.1-like protein 3

    See identical proteins and their annotated locations for NP_001126641.1

    Status: PROVISIONAL

    Source sequence(s)
    CR860696
    UniProtKB/TrEMBL
    H2NVX1, Q5R604
    Related
    ENSPPYP00000036843.1, ENSPPYT00000047268.1
    Conserved Domains (7) summary
    smart00295
    Location:7 → 192
    B41; Band 4.1 homologues
    cd13184
    Location:187 → 280
    FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
    pfam00373
    Location:87 → 192
    FERM_M; FERM central domain
    pfam04382
    Location:439 → 485
    SAB; SAB domain
    pfam05902
    Location:696 → 801
    4_1_CTD; 4.1 protein C-terminal domain (CTD)
    pfam08736
    Location:289 → 329
    FA; FERM adjacent (FA)
    pfam09379
    Location:7 → 65
    FERM_N; FERM N-terminal domain

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072002.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    29439924..29689292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054537537.2 → XP_054393512.2  band 4.1-like protein 3 isoform X30

    UniProtKB/TrEMBL
    H2NVX1

  2. XM_054537507.2 → XP_054393482.2  band 4.1-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8I5TIK4

  3. XM_054537508.2 → XP_054393483.2  band 4.1-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A2J8XGV5

  4. XM_054537513.2 → XP_054393488.2  band 4.1-like protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  5. XM_054537514.2 → XP_054393489.2  band 4.1-like protein 3 isoform X7

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  6. XM_054537522.2 → XP_054393497.2  band 4.1-like protein 3 isoform X15

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  7. XM_054537512.2 → XP_054393487.2  band 4.1-like protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A2J8XGV5

  8. XM_054537520.2 → XP_054393495.2  band 4.1-like protein 3 isoform X13

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  9. XM_054537530.2 → XP_054393505.2  band 4.1-like protein 3 isoform X23

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  10. XM_054537516.2 → XP_054393491.2  band 4.1-like protein 3 isoform X9

    UniProtKB/TrEMBL
    A0A2J8XGV5

  11. XM_054537524.2 → XP_054393499.2  band 4.1-like protein 3 isoform X17

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  12. XM_054537526.2 → XP_054393501.2  band 4.1-like protein 3 isoform X19

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  13. XM_054537509.2 → XP_054393484.2  band 4.1-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8I5TIK4

  14. XM_054537521.2 → XP_054393496.2  band 4.1-like protein 3 isoform X14

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  15. XM_054537532.2 → XP_054393507.2  band 4.1-like protein 3 isoform X25

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  16. XM_054537517.2 → XP_054393492.2  band 4.1-like protein 3 isoform X10

    UniProtKB/TrEMBL
    A0A2J8XGV5

  17. XM_054537528.2 → XP_054393503.2  band 4.1-like protein 3 isoform X21

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  18. XM_054537535.2 → XP_054393510.2  band 4.1-like protein 3 isoform X28

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  19. XM_054537511.2 → XP_054393486.2  band 4.1-like protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A8I5YMA5

  20. XM_054537525.2 → XP_054393500.2  band 4.1-like protein 3 isoform X18

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  21. XM_054537527.2 → XP_054393502.2  band 4.1-like protein 3 isoform X20

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  22. XM_054537534.2 → XP_054393509.2  band 4.1-like protein 3 isoform X27

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  23. XM_054537536.2 → XP_054393511.2  band 4.1-like protein 3 isoform X29

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  24. XM_054537519.2 → XP_054393494.2  band 4.1-like protein 3 isoform X12

    UniProtKB/TrEMBL
    A0A2J8XGV5

  25. XM_054537529.2 → XP_054393504.2  band 4.1-like protein 3 isoform X22

    UniProtKB/TrEMBL
    A0A2J8XGV0, A0A8I5TTQ2

  26. XM_054537531.2 → XP_054393506.2  band 4.1-like protein 3 isoform X24

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  27. XM_054537523.2 → XP_054393498.2  band 4.1-like protein 3 isoform X16

    UniProtKB/TrEMBL
    A0A2J8XGV5

  28. XM_054537533.2 → XP_054393508.2  band 4.1-like protein 3 isoform X26

    UniProtKB/TrEMBL
    A0A2J8XGU9, A0A8I5U4Q2

  29. XM_054537518.2 → XP_054393493.2  band 4.1-like protein 3 isoform X11

  30. XM_054537515.2 → XP_054393490.2  band 4.1-like protein 3 isoform X8

Nucleotide Protein
Heading Accession and Version

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