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SLC9A6 solute carrier family 9 member A6 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100171878, updated on 3-Apr-2024

Summary

Gene symbol
SLC9A6
Gene description
solute carrier family 9 member A6
Locus tag
CR201_G0006946
See related
Ensembl:ENSPPYG00000020759
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See SLC9A6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) X NC_072008.2 (142074551..142136656)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) X NC_072008.1 (142074553..142136516)

Chromosome X - NC_072008.2Genomic Context describing neighboring genes Neighboring gene cancer/testis antigen family 45 member A6-like Neighboring gene membrane magnesium transporter 1 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • DKFZp459O1854

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables sodium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in sodium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
sodium/hydrogen exchanger 6
Names
solute carrier family 9 (sodium/hydrogen exchanger), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131528.1NP_001125000.1  sodium/hydrogen exchanger 6 precursor

    See identical proteins and their annotated locations for NP_001125000.1

    Status: PROVISIONAL

    Source sequence(s)
    CR857834
    UniProtKB/TrEMBL
    A0A8I5TVF7, Q5RDR8
    Related
    ENSPPYP00000023238.2, ENSPPYT00000024209.3
    Conserved Domains (1) summary
    pfam00999
    Location:176533
    Na_H_Exchanger; Sodium/hydrogen exchanger family

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072008.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    142074551..142136656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054543983.2XP_054399958.1  sodium/hydrogen exchanger 6 isoform X2

  2. XM_054543982.2XP_054399957.1  sodium/hydrogen exchanger 6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8WX28, A0A663DBQ5, H2PWW5