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Lim2 lens intrinsic membrane protein 2 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100170759, updated on 8-Mar-2024

Summary

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Gene symbol
Lim2
Gene description
lens intrinsic membrane protein 2
See related
Ensembl:ENSCPOG00000021206
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Lim2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947490.1 (29442116..29446301, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176349.1 (6518667..6522755)

NW_026947490.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134476905 Neighboring gene claudin domain containing 2 Neighboring gene natural killer cell granule protein 7 Neighboring gene uncharacterized LOC134476906 Neighboring gene chromosome unknown C19orf84 homolog Neighboring gene sialic acid binding Ig like lectin 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expressed sequence tag analysis of guinea pig (Cavia porcellus) eye tissues for NEIBank. Simpanya MF, et al. Mol Vis, 2008. PMID 19104676, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lens fiber membrane intrinsic protein
Names
lens-specific claudin/tetraspan Mp19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001173039.1 → NP_001166510.1  lens fiber membrane intrinsic protein

    See identical proteins and their annotated locations for NP_001166510.1

    Status: PROVISIONAL

    Source sequence(s)
    EU827600
    UniProtKB/TrEMBL
    B5A9S2
    Related
    ENSCPOP00000018665.1, ENSCPOT00000022286.2
    Conserved Domains (1) summary
    cl21598
    Location:1 → 157
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947490.1 Reference mCavPor4.1

    Range
    29442116..29446301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063252056.1 → XP_063108126.1  lens fiber membrane intrinsic protein isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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