Carhsp1 calcium regulated heat stable protein 1, 24kDa [Acyrthosiphon pisum (pea aphid)] - Gene

Summary

Gene symbol: Carhsp1
Gene description: calcium regulated heat stable protein 1, 24kDa
See related: APHIDBASE:ACYPI008400; EnsemblRapid:GeneID_100167621
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Acyrthosiphon pisum
Lineage: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs: fruit fly all
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Genomic context

Location:: chromosome: A3

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
103	current	pea_aphid_22Mar2018_4r6ur (GCF_005508785.1)	A3	NC_042496.1 (16567169..16568482)
102	previous assembly	Acyr_2.0 (GCF_000142985.2)	Unplaced Scaffold	NW_003384247.1 (89050..90363, complement)

Chromosome A3 - NC_042496.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables mRNA 3'-UTR binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of mRNA stability	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: calcium-regulated heat stable protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001162792.2 → NP_001156264.1 calcium-regulated heat stable protein 1

See identical proteins and their annotated locations for NP_001156264.1

Status: PROVISIONAL

Source sequence(s)

AK340624

UniProtKB/TrEMBL

C4WTI2

Related

NP_001156264.1, NM_001162792.2

Conserved Domains (1) summary

cd04458
Location:53 → 118

CSP_CDS; Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. ...