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Luc7l LUC7-like (S. cerevisiae) [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100159554, updated on 10-May-2024

Summary

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Gene symbol
Luc7l
Gene description
LUC7-like (S. cerevisiae)
See related
APHIDBASE:ACYPI000913; EnsemblRapid:GeneID_100159554
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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See Luc7l in Genome Data Viewer
Location:
chromosome: A2
Exon count:
8
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A2 NC_042495.1 (8203465..8209669)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383627.1 (659387..665591)

Chromosome A2 - NC_042495.1Genomic Context describing neighboring genes Neighboring gene calponin homology domain-containing protein DDB_G0272472 Neighboring gene Chitin deacetylase-like 5 Neighboring gene TNF receptor-associated factor family protein DDB_G0272098-like Neighboring gene rho GDP-dissociation inhibitor Neighboring gene SREBP cleavage activating protein Neighboring gene ATP-binding cassette sub-family A member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LUC7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135724.2 → NP_001129196.1  LUC7-like

    See identical proteins and their annotated locations for NP_001129196.1

    Status: VALIDATED

    Source sequence(s)
    SDIB01021919
    UniProtKB/TrEMBL
    C4WSW9
    Related
    NP_001129196.1, NM_001135724.1
    Conserved Domains (2) summary
    COG5200
    Location:5 → 260
    LUC7; U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification]
    pfam03194
    Location:5 → 245
    LUC7; LUC7 N_terminus

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042495.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    8203465..8209669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029488874.1 → XP_029344734.1  LUC7-like isoform X2

    UniProtKB/TrEMBL
    A0A8R2JRH3
    Related
    XP_029344734.1, XM_029488874.1
    Conserved Domains (1) summary
    pfam03194
    Location:1 → 178
    LUC7; LUC7 N_terminus

  2. XM_029488875.1 → XP_029344735.1  LUC7-like isoform X2

    UniProtKB/TrEMBL
    A0A8R2JRH3
    Related
    XP_029344735.1, XM_029488875.1
    Conserved Domains (1) summary
    pfam03194
    Location:1 → 178
    LUC7; LUC7 N_terminus

  3. XM_029488873.1 → XP_029344733.1  LUC7-like isoform X1

    UniProtKB/TrEMBL
    A0A8R2JQN1
    Related
    XP_029344733.1, XM_029488873.1
    Conserved Domains (1) summary
    pfam03194
    Location:13 → 191
    LUC7; LUC7 N_terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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