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ACYPI34361 Gastric cancer antigen Zg14 homolog-like [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100158762, updated on 10-May-2024

Summary

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Gene symbol
ACYPI34361
Gene description
Gastric cancer antigen Zg14 homolog-like
See related
APHIDBASE:ACYPI000197; EnsemblRapid:GeneID_100158762
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: A3
Exon count:
7
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A3 NC_042496.1 (27129049..27131981)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384855.1 (16883..19815, complement)

Chromosome A3 - NC_042496.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P protein subunit Rpp25 Neighboring gene Tyrosine decarboxylase 2 Neighboring gene MOB kinase activator 4 Neighboring gene uncharacterized LOC100569022 Neighboring gene uncharacterized LOC107884863

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CURI complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of UTP-C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Gastric cancer antigen Zg14 homolog-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001161899.2 → NP_001155371.1  Gastric cancer antigen Zg14 homolog-like

    See identical proteins and their annotated locations for NP_001155371.1

    Status: PROVISIONAL

    Source sequence(s)
    AK340306
    UniProtKB/TrEMBL
    C4WSR6
    Related
    NP_001155371.1, NM_001161899.2
    Conserved Domains (2) summary
    cd12951
    Location:138 → 266
    RRP7_Rrp7A; RRP7 domain ribosomal RNA-processing protein 7 homolog A (Rrp7A) and similar proteins
    cd12294
    Location:42 → 145
    RRM_Rrp7A; RNA recognition motif in ribosomal RNA-processing protein 7 homolog A (Rrp7A) and similar proteins

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042496.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    27129049..27131981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials