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evi5l ecotropic viral integration site 5-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145757, updated on 8-Mar-2024

Summary

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Official Symbol
evi5lprovided by Xenbase
Official Full Name
ecotropic viral integration site 5-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-5723194
See related
Ensembl:ENSXETG00000022868
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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See evi5l in Genome Data Viewer
Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (134011445..134046434)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (123635632..123667066)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116409805 Neighboring gene C-type lectin domain family 4 member G Neighboring gene transforming growth factor beta receptor 3 like Neighboring gene mitogen-activated protein kinase kinase 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
EVI5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127128.1 → NP_001120600.1  EVI5-like protein

    See identical proteins and their annotated locations for NP_001120600.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161635
    UniProtKB/TrEMBL
    A0A6I8R939, B1WB67
    Related
    ENSXETP00000081503.2, ENSXETT00000078269.2
    Conserved Domains (1) summary
    smart00164
    Location:101 → 309
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    134011445..134046434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031897655.1 → XP_031753515.1  EVI5-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8J1J918
    Conserved Domains (2) summary
    smart00164
    Location:112 → 320
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:358 → 658
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_031897653.1 → XP_031753513.1  EVI5-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6I8SZX9
    Related
    ENSXETP00000099311.2, ENSXETT00000101390.2
    Conserved Domains (2) summary
    smart00164
    Location:112 → 320
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    TIGR02168
    Location:376 → 711
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_031897654.1 → XP_031753514.1  EVI5-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8J1J6M0
    Conserved Domains (2) summary
    smart00164
    Location:112 → 320
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    COG1196
    Location:385 → 701
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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