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tmem44 transmembrane protein 44 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145595, updated on 17-Aug-2024

Summary

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Official Symbol
tmem44provided by Xenbase
Official Full Name
transmembrane protein 44provided by Xenbase
Primary source
Xenbase:XB-GENE-1005798
See related
Ensembl:ENSXETG00000030725
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (106705976..106725236)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (97210803..97228699, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 43 member A Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene ATPase type 13A3 Neighboring gene glycoprotein V platelet

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127007.1 → NP_001120479.1  transmembrane protein 44

    See identical proteins and their annotated locations for NP_001120479.1

    Status: PROVISIONAL

    Source sequence(s)
    BC161347
    UniProtKB/TrEMBL
    B1H3C7
    Related
    ENSXETP00000063946.2, ENSXETT00000065105.3

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    106705976..106725236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031901524.1 → XP_031757384.1  transmembrane protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A8J1JHN8

  2. XM_031901523.1 → XP_031757383.1  transmembrane protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A8J1JHN2

  3. XM_012962741.3 → XP_012818195.1  transmembrane protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A8J0SKQ5
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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