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fam20a family with sequence similarity 20 member A [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145530, updated on 25-Apr-2024

Summary

Official Symbol
fam20aprovided by Xenbase
Official Full Name
family with sequence similarity 20 member Aprovided by Xenbase
Primary source
Xenbase:XB-GENE-5943784
See related
Ensembl:ENSXETG00000018296
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

See fam20a in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (50497981..50518629)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683857.1 (17467..29755)

Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 20 member A gene 2 Neighboring gene synthesis of cytochrome C oxidase 1 Neighboring gene protein kinase cAMP-dependent type I regulatory subunit alpha Neighboring gene actin-related protein 2/3 complex subunit 1A-B

Genomic regions, transcripts, and products

General protein information

Preferred Names
uncharacterized protein LOC100145530

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126969.1NP_001120441.1  uncharacterized protein LOC100145530

    See identical proteins and their annotated locations for NP_001120441.1

    Status: PREDICTED

    Source sequence(s)
    BC161208
    UniProtKB/TrEMBL
    B1H312, F7BIX9
    Related
    ENSXETP00000039636.5, ENSXETT00000039636.5
    Conserved Domains (1) summary
    pfam06702
    Location:282499
    Fam20C; Golgi casein kinase, C-terminal, Fam20

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    50497981..50518629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)