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cfap65 cilia and flagella associated protein 65 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100144742, updated on 18-Sep-2024

Summary

Official Symbol
cfap65provided by Xenbase
Official Full Name
cilia and flagella associated protein 65provided by Xenbase
Primary source
Xenbase:XB-GENE-1001102
See related
Ensembl:ENSXETG00000013869
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ccdc108
Orthologs
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Genomic context

Location:
chromosome: 9
Exon count:
33
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (82862220..82887562, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (77574325..77599376, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene crystallin beta A2 Neighboring gene microRNA mir-375 Neighboring gene motor neuron and pancreas homeobox protein 1-like Neighboring gene indian hedgehog

Genomic regions, transcripts, and products

General protein information

Preferred Names
cilia- and flagella-associated protein 65
Names
coiled-coil domain containing 108

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001123490.1NP_001116962.1  cilia- and flagella-associated protein 65

    See identical proteins and their annotated locations for NP_001116962.1

    Status: PROVISIONAL

    Source sequence(s)
    BC159158
    UniProtKB/TrEMBL
    B0JZF6
    Conserved Domains (1) summary
    pfam14874
    Location:316382
    PapD-like; Flagellar-associated PapD-like

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    82862220..82887562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012970047.3XP_012825501.1  cilia- and flagella-associated protein 65 isoform X1

    UniProtKB/TrEMBL
    A0A6I8R4J7
    Related
    ENSXETP00000080657.1, ENSXETT00000087034.2
    Conserved Domains (1) summary
    pfam14874
    Location:365431
    PapD-like; Flagellar-associated PapD-like