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ZNF329 zinc finger protein 329 [ Bos taurus (cattle) ]

Gene ID: 100138653, updated on 6-Jun-2024

Summary

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Official Symbol
ZNF329provided by VGNC
Official Full Name
zinc finger protein 329provided by VGNC
Primary source
VGNC:VGNC:53038
See related
BGD:BT20287; Ensembl:ENSBTAG00000003465
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ZNF329 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (65518957..65531986, complement)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112442229 Neighboring gene zinc finger protein 135 Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger protein 274 Neighboring gene uncharacterized LOC101902458

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 329

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206807.1 → NP_001193736.1  zinc finger protein 329

    Status: VALIDATED

    Source sequence(s)
    AAFC03032688, BC149009
    Related
    ENSBTAP00000094403.1, ENSBTAT00000114487.1
    Conserved Domains (4) summary
    COG5048
    Location:182 → 526
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:230 → 250
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:200 → 222
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:270 → 295
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    65518957..65531986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024977917.2 → XP_024833685.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5
    Related
    ENSBTAP00000095265.1, ENSBTAT00000133034.1
    Conserved Domains (4) summary
    COG5048
    Location:211 → 466
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:230 → 250
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:480 → 502
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:467 → 491
    zf-H2C2_2; Zinc-finger double domain

  2. XM_059876489.1 → XP_059732472.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5
    Related
    ENSBTAP00000086463.1, ENSBTAT00000121588.1

  3. XM_059876488.1 → XP_059732471.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5

  4. XM_024977918.2 → XP_024833686.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5
    Conserved Domains (4) summary
    COG5048
    Location:211 → 466
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:230 → 250
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:480 → 502
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:467 → 491
    zf-H2C2_2; Zinc-finger double domain

  5. XM_059876490.1 → XP_059732473.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5

  6. XM_024977919.1 → XP_024833687.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5
    Related
    ENSBTAP00000004507.7, ENSBTAT00000004507.7
    Conserved Domains (4) summary
    COG5048
    Location:211 → 466
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:230 → 250
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:480 → 502
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:467 → 491
    zf-H2C2_2; Zinc-finger double domain

  7. XM_024977920.1 → XP_024833688.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5
    Related
    ENSBTAP00000076991.1, ENSBTAT00000094301.1
    Conserved Domains (4) summary
    COG5048
    Location:211 → 466
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:230 → 250
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:480 → 502
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:467 → 491
    zf-H2C2_2; Zinc-finger double domain

  8. XM_059876487.1 → XP_059732470.1  zinc finger protein 329 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1M309, F1N0P5
Nucleotide Protein Strain
Heading Accession and Version

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