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khnyn.S KH and NYN domain containing S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100137686, updated on 11-Apr-2024

Summary

Official Symbol
khnyn.S
Official Full Name
KH and NYN domain containing S homeolog
Primary source
Xenbase:XB-GENE-1219054
Locus tag
XELAEV_18010297mg
See related
EnsemblRapid:ENSXLAG00005012653
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
khnyn
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Genomic context

See khnyn.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (131708591..131722862)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (116510234..116524537)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 4 S homeolog Neighboring gene uncharacterized LOC121399459 Neighboring gene epimerase family protein SDR39U1 Neighboring gene purine nucleoside phosphorylase S homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
KH and NYN domain containing S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114817.1NP_001108289.1  KH and NYN domain containing S homeolog

    See identical proteins and their annotated locations for NP_001108289.1

    Status: PROVISIONAL

    Source sequence(s)
    BC157720
    UniProtKB/TrEMBL
    A0A974DV43, A9UMM8
    Related
    ENSXLAP00005037176.1, ENSXLAT00005038085.1
    Conserved Domains (1) summary
    pfam11977
    Location:573726
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    131708591..131722862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)