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PAX4 paired box 4 [ Papio anubis (olive baboon) ]

Gene ID: 100137394, updated on 8-Mar-2024

Summary

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Gene symbol
PAX4
Gene description
paired box 4
Gene type
protein coding
RefSeq status
INFERRED
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 4 NC_044979.1 (30754934..30756761)
103 previous assembly Panu_3.0 (GCF_000264685.3) 3 NC_018154.2 (150348450..150350277, complement)

Chromosome 4 - NC_044979.1Genomic Context describing neighboring genes Neighboring gene staphylococcal nuclease and tudor domain containing 1 Neighboring gene CD2 antigen cytoplasmic tail-binding protein 2 pseudogene Neighboring gene uncharacterized LOC116274667 Neighboring gene uncharacterized LOC103883222 Neighboring gene fascin actin-bundling protein 3 Neighboring gene ADP ribosylation factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired box protein Pax-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001168929.1 → NP_001162400.1  paired box protein Pax-4

    See identical proteins and their annotated locations for NP_001162400.1

    Status: INFERRED

    Source sequence(s)
    DP000510
    UniProtKB/TrEMBL
    A9RA81
    Conserved Domains (2) summary
    smart00351
    Location:2 → 121
    PAX; Paired Box domain
    COG3415
    Location:11 → 154
    COG3415; Transposase [Mobilome: prophages, transposons]

RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044979.1 Reference Panubis1.0 Primary Assembly

    Range
    30754934..30756761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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