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rnf145l RING finger protein 145-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100127651, updated on 2-May-2024

Summary

Official Symbol
rnf145lprovided by Xenbase
Official Full Name
RING finger protein 145-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-5921670
See related
Ensembl:ENSXETG00000012753
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

See rnf145l in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (15873300..15885876)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (9647697..9657239)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene HEPACAM family member 2 like Neighboring gene provisional ortholog of G protein-coupled receptor 151 Neighboring gene uncharacterized LOC116408423 Neighboring gene COE3-like Neighboring gene carboxypeptidase X (M14 family), member 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein LOC100127651

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112996.1NP_001106467.1  uncharacterized protein LOC100127651

    See identical proteins and their annotated locations for NP_001106467.1

    Status: PREDICTED

    Source sequence(s)
    BC154087
    UniProtKB/TrEMBL
    A0A6I8PQ01, A8KBF0
    Related
    ENSXETP00000061630.3, ENSXETT00000061722.3
    Conserved Domains (3) summary
    pfam12678
    Location:528569
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:529569
    zf-RING_2; Ring finger domain
    pfam13705
    Location:5500
    TRC8_N; TRC8 N-terminal domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    15873300..15885876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)