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CDC42EP3 CDC42 effector protein 3 [ Equus caballus (horse) ]

Gene ID: 100070148, updated on 17-Aug-2024

Summary

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Official Symbol
CDC42EP3provided by VGNC
Official Full Name
CDC42 effector protein 3provided by VGNC
Primary source
VGNC:VGNC:16299
See related
Ensembl:ENSECAG00000022741
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (61077111..61100752)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene regulator of microtubule dynamics 2 Neighboring gene uncharacterized LOC111768225 Neighboring gene uncharacterized LOC102149301 Neighboring gene uncharacterized LOC111768226

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of pseudopodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cdc42 effector protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    61077111..61100752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023619226.1 → XP_023474994.1  cdc42 effector protein 3

    UniProtKB/TrEMBL
    F6VU60
    Related
    ENSECAP00000085636.1, ENSECAT00000134833.1
    Conserved Domains (2) summary
    pfam14957
    Location:102 → 253
    BORG_CEP; Cdc42 effector
    cl00113
    Location:30 → 84
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...

  2. XM_001500790.6 → XP_001500840.1  cdc42 effector protein 3

    See identical proteins and their annotated locations for XP_001500840.1

    UniProtKB/TrEMBL
    F6VU60
    Related
    ENSECAP00000058527.1, ENSECAT00000094523.1
    Conserved Domains (2) summary
    pfam14957
    Location:102 → 253
    BORG_CEP; Cdc42 effector
    cl00113
    Location:30 → 84
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
Nucleotide Protein
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