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MKLN1 muskelin 1 [ Equus caballus (horse) ]

Gene ID: 100068568, updated on 8-Mar-2024

Summary

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Official Symbol
MKLN1provided by VGNC
Official Full Name
muskelin 1provided by VGNC
Primary source
VGNC:VGNC:20203
See related
Ensembl:ENSECAG00000024078
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MKLN1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
24
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 4 NC_009147.3 (85647687..85968894)
102 previous assembly EquCab2.0 (GCF_000002305.2) 4 NC_009147.2 (85532208..85845174)

Chromosome 4 - NC_009147.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106783112 Neighboring gene uncharacterized LOC102149605 Neighboring gene uncharacterized LOC111773256 Neighboring gene uncharacterized LOC102149527 Neighboring gene uncharacterized LOC106783100 Neighboring gene podocalyxin like Neighboring gene uncharacterized LOC111773257

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
muskelin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009147.3 Reference EquCab3.0 Primary Assembly

    Range
    85647687..85968894
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005609409.3 → XP_005609466.1  muskelin isoform X3

    UniProtKB/TrEMBL
    A0A3Q2IDY9, A0A3Q2LCM6
    Related
    ENSECAP00000037832.1, ENSECAT00000050954.3
    Conserved Domains (5) summary
    smart00668
    Location:179 → 231
    CTLH; C-terminal to LisH motif
    PLN02153
    Location:280 → 448
    PLN02153; epithiospecifier protein
    sd00038
    Location:244 → 296
    Kelch; KELCH repeat [structural motif]
    pfam06588
    Location:7 → 180
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:255 → 307
    Kelch_3; Galactose oxidase, central domain

  2. XM_023639693.1 → XP_023495461.1  muskelin isoform X2

    UniProtKB/TrEMBL
    A0A3Q2IDY9, A0A5F5PIB3
    Related
    ENSECAP00000048243.2, ENSECAT00000068292.2
    Conserved Domains (4) summary
    sd00038
    Location:247 → 299
    Kelch; KELCH repeat [structural motif]
    pfam06588
    Location:10 → 183
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:258 → 310
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:283 → 451
    PLN02193; nitrile-specifier protein

  3. XM_023639695.1 → XP_023495463.1  muskelin isoform X4

    UniProtKB/TrEMBL
    A0A3Q2IDY9, A0A9L0RI68
    Related
    ENSECAP00000063635.1, ENSECAT00000096182.1
    Conserved Domains (5) summary
    smart00668
    Location:176 → 228
    CTLH; C-terminal to LisH motif
    PLN02153
    Location:277 → 445
    PLN02153; epithiospecifier protein
    sd00038
    Location:241 → 293
    Kelch; KELCH repeat [structural motif]
    pfam06588
    Location:4 → 177
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:252 → 304
    Kelch_3; Galactose oxidase, central domain

  4. XM_023639694.1 → XP_023495462.1  muskelin isoform X2

    UniProtKB/TrEMBL
    A0A3Q2IDY9, A0A5F5PIB3
    Conserved Domains (4) summary
    sd00038
    Location:247 → 299
    Kelch; KELCH repeat [structural motif]
    pfam06588
    Location:10 → 183
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:258 → 310
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:283 → 451
    PLN02193; nitrile-specifier protein

  5. XM_023639697.1 → XP_023495465.1  muskelin isoform X7

    Conserved Domains (3) summary
    PLN02153
    Location:100 → 268
    PLN02153; epithiospecifier protein
    sd00038
    Location:64 → 116
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:75 → 127
    Kelch_3; Galactose oxidase, central domain

  6. XM_023639696.1 → XP_023495464.1  muskelin isoform X5

    UniProtKB/TrEMBL
    A0A3Q2HFI6, A0A3Q2IDY9
    Related
    ENSECAP00000033175.2, ENSECAT00000058674.2
    Conserved Domains (5) summary
    smart00668
    Location:174 → 226
    CTLH; C-terminal to LisH motif
    sd00038
    Location:239 → 291
    Kelch; KELCH repeat [structural motif]
    pfam06588
    Location:2 → 175
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:250 → 302
    Kelch_3; Galactose oxidase, central domain
    cl26061
    Location:275 → 443
    PLN02193; nitrile-specifier protein

  7. XM_001500999.5 → XP_001501049.1  muskelin isoform X1

    UniProtKB/TrEMBL
    A0A9L0RKB1, A0A9L0SE27
    Related
    ENSECAP00000072444.1, ENSECAT00000098952.1
    Conserved Domains (5) summary
    smart00668
    Location:206 → 258
    CTLH; C-terminal to LisH motif
    PLN02153
    Location:307 → 475
    PLN02153; epithiospecifier protein
    sd00038
    Location:271 → 323
    Kelch; KELCH repeat [structural motif]
    pfam06588
    Location:12 → 207
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:282 → 334
    Kelch_3; Galactose oxidase, central domain

  8. XM_005609411.3 → XP_005609468.1  muskelin isoform X6

    UniProtKB/TrEMBL
    A0A9L0RKB1
    Related
    ENSECAP00000021684.3, ENSECAT00000026029.3
    Conserved Domains (5) summary
    smart00668
    Location:206 → 258
    CTLH; C-terminal to LisH motif
    sd00038
    Location:271 → 323
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:456 → 493
    Kelch_1; Kelch motif
    pfam06588
    Location:12 → 207
    Muskelin_N; Muskelin N-terminus
    pfam13415
    Location:282 → 334
    Kelch_3; Galactose oxidase, central domain

  9. XM_023639698.1 → XP_023495466.1  muskelin isoform X7

    Conserved Domains (3) summary
    PLN02153
    Location:100 → 268
    PLN02153; epithiospecifier protein
    sd00038
    Location:64 → 116
    Kelch; KELCH repeat [structural motif]
    pfam13415
    Location:75 → 127
    Kelch_3; Galactose oxidase, central domain
Nucleotide Protein
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