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SLCO1B3 solute carrier organic anion transporter family member 1B3 [ Equus caballus (horse) ]

Gene ID: 100068155, updated on 8-Mar-2024

Summary

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Gene symbol
SLCO1B3
Gene description
solute carrier organic anion transporter family member 1B3
See related
Ensembl:ENSECAG00000013008
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
Oatp1b4
Orthologs
human mouse all
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Genomic context

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See SLCO1B3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (48670761..48748040)
102 previous assembly EquCab2.0 (GCF_000002305.2) 6 NC_009149.2 (47422215..47485465)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 3A Neighboring gene solute carrier organic anion transporter family member 1C1 Neighboring gene solute carrier organic anion transporter family member 1C1-like Neighboring gene solute carrier organic anion transporter family member 1A2 Neighboring gene islet amyloid polypeptide Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 1 Neighboring gene RecQ like helicase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 1B3
Names
organic anion transporter polypeptide 1b4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001317251.1 → NP_001304180.1  solute carrier organic anion transporter family member 1B3

    Status: PROVISIONAL

    Source sequence(s)
    LN833581
    UniProtKB/TrEMBL
    A0A0E8PL88
    Related
    ENSECAP00000010749.2, ENSECAT00000013533.4
    Conserved Domains (3) summary
    cd06174
    Location:31 → 429
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd01330
    Location:455 → 508
    KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
    pfam03137
    Location:29 → 621
    OATP; Organic Anion Transporter Polypeptide (OATP) family

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    48670761..48748040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023642201.1 → XP_023497969.1  solute carrier organic anion transporter family member 1B3 isoform X1

    UniProtKB/TrEMBL
    F6SUK0
    Conserved Domains (1) summary
    pfam03137
    Location:30 → 622
    OATP; Organic Anion Transporter Polypeptide (OATP) family

  2. XM_023642200.1 → XP_023497968.1  solute carrier organic anion transporter family member 1B3 isoform X1

    UniProtKB/TrEMBL
    F6SUK0
    Conserved Domains (1) summary
    pfam03137
    Location:30 → 622
    OATP; Organic Anion Transporter Polypeptide (OATP) family

  3. XM_005610968.3 → XP_005611025.1  solute carrier organic anion transporter family member 1B3 isoform X1

    See identical proteins and their annotated locations for XP_005611025.1

    UniProtKB/TrEMBL
    F6SUK0
    Conserved Domains (1) summary
    pfam03137
    Location:30 → 622
    OATP; Organic Anion Transporter Polypeptide (OATP) family
Nucleotide Protein
Heading Accession and Version

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