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GLIS2 GLIS family zinc finger 2 [ Equus caballus (horse) ]

Gene ID: 100066071, updated on 8-Mar-2024

Summary

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Official Symbol
GLIS2provided by VGNC
Official Full Name
GLIS family zinc finger 2provided by VGNC
Primary source
VGNC:VGNC:18378
See related
Ensembl:ENSECAG00000020639
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (39850743..39871962, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 13 NC_009156.2 (38615124..38624753, complement)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene coronin-7 Neighboring gene vasorin Neighboring gene presequence translocase associated motor 16 Neighboring gene uncharacterized LOC111767577 Neighboring gene transcription factor AP-4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein GLIS2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    39850743..39871962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023616416.1 → XP_023472184.1  zinc finger protein GLIS2

    UniProtKB/TrEMBL
    A0A9L0RKH3, A0A9L0S6Y2
    Related
    ENSECAP00000063296.1, ENSECAT00000127098.1
    Conserved Domains (2) summary
    COG5048
    Location:233 → 327
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:213 → 229
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_023616414.1 → XP_023472182.1  zinc finger protein GLIS2

    UniProtKB/TrEMBL
    A0A9L0RKH3, A0A9L0S6Y2
    Conserved Domains (2) summary
    COG5048
    Location:233 → 327
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:213 → 229
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_023616415.1 → XP_023472183.1  zinc finger protein GLIS2

    UniProtKB/TrEMBL
    A0A9L0RKH3, A0A9L0S6Y2
    Conserved Domains (2) summary
    COG5048
    Location:233 → 327
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:213 → 229
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_005599004.3 → XP_005599061.1  zinc finger protein GLIS2

    See identical proteins and their annotated locations for XP_005599061.1

    UniProtKB/TrEMBL
    A0A9L0RKH3, A0A9L0S6Y2
    Conserved Domains (2) summary
    COG5048
    Location:233 → 327
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:213 → 229
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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