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PNPLA1 patatin like phospholipase domain containing 1 [ Equus caballus (horse) ]

Gene ID: 100063661, updated on 8-Mar-2024

Summary

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Official Symbol
PNPLA1provided by VGNC
Official Full Name
patatin like phospholipase domain containing 1provided by VGNC
Primary source
VGNC:VGNC:21633
See related
Ensembl:ENSECAG00000012343
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PNPLA1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 20 NC_009163.3 (37147736..37188072)
102 previous assembly EquCab2.0 (GCF_000002305.2) 20 NC_009163.2 (36246675..36289627)

Chromosome 20 - NC_009163.3Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 13 Neighboring gene bromodomain and PHD finger containing 3 Neighboring gene uncharacterized LOC111769313 Neighboring gene BCL2 interacting protein 5 Neighboring gene ETS variant transcription factor 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triglyceride lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009163.3 Reference EquCab3.0 Primary Assembly

    Range
    37147736..37188072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023624834.1 → XP_023480602.1  patatin-like phospholipase domain-containing protein 1

    UniProtKB/TrEMBL
    A0A9L0RYV9, A0A9L0S7S1
    Related
    ENSECAP00000070079.1, ENSECAT00000098381.1
    Conserved Domains (1) summary
    cd07219
    Location:2 → 382
    Pat_PNPLA1; Patatin-like phospholipase domain containing protein 1
Nucleotide Protein
Heading Accession and Version

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