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CARNS1 carnosine synthase 1 [ Equus caballus (horse) ]

Gene ID: 100059309, updated on 17-Aug-2024

Summary

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Official Symbol
CARNS1provided by VGNC
Official Full Name
carnosine synthase 1provided by VGNC
Primary source
VGNC:VGNC:58137
See related
Ensembl:ENSECAG00000012116
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (30883774..30892805)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 catalytic subunit alpha Neighboring gene TBC1 domain family member 10C Neighboring gene ribosomal protein S6 kinase B2 Neighboring gene protein tyrosine phosphatase receptor type C associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009155.3 Chromosome 12 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carnosine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables homocarnosine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnosine synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    30883774..30892805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023654561.1 → XP_023510329.1  carnosine synthase 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F5PTY9, A0A5F5PWP7
    Related
    ENSECAP00000051746.2, ENSECAT00000069873.2
    Conserved Domains (1) summary
    cl28390
    Location:537 → 937
    ArgH; Argininosuccinate lyase [Amino acid transport and metabolism]

  2. XM_023654560.1 → XP_023510328.1  carnosine synthase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PWP7
    Conserved Domains (1) summary
    cl28390
    Location:539 → 939
    ArgH; Argininosuccinate lyase [Amino acid transport and metabolism]

  3. XM_023654564.1 → XP_023510332.1  carnosine synthase 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F5PWP7, F6T6M5
    Related
    ENSECAP00000009958.3, ENSECAT00000012605.4
    Conserved Domains (1) summary
    cl28390
    Location:413 → 813
    ArgH; Argininosuccinate lyase [Amino acid transport and metabolism]

  4. XM_023654562.1 → XP_023510330.1  carnosine synthase 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F5PTY9, A0A5F5PWP7
    Conserved Domains (1) summary
    cl28390
    Location:537 → 937
    ArgH; Argininosuccinate lyase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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