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PHC3 polyhomeotic homolog 3 [ Equus caballus (horse) ]

Gene ID: 100057566, updated on 17-Aug-2024

Summary

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Official Symbol
PHC3provided by VGNC
Official Full Name
polyhomeotic homolog 3provided by VGNC
Primary source
VGNC:VGNC:49321
See related
Ensembl:ENSECAG00000006043
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PHC3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (12885401..12961682, complement)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111769012 Neighboring gene G protein-coupled receptor 160 Neighboring gene protein kinase C iota Neighboring gene basic proline-rich protein-like Neighboring gene SKI like proto-oncogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009162.3 Chromosome 19 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyhomeotic-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    12885401..12961682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023623294.1 → XP_023479062.1  polyhomeotic-like protein 3 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Conserved Domains (2) summary
    cd09577
    Location:857 → 925
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:153 → 499
    Atrophin-1; Atrophin-1 family

  2. XM_023623293.1 → XP_023479061.1  polyhomeotic-like protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Related
    ENSECAP00000051721.2, ENSECAT00000076440.2
    Conserved Domains (2) summary
    cd09577
    Location:890 → 958
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:186 → 532
    Atrophin-1; Atrophin-1 family

  3. XM_023623292.1 → XP_023479060.1  polyhomeotic-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Related
    ENSECAP00000028663.1, ENSECAT00000060674.2
    Conserved Domains (2) summary
    cd09577
    Location:927 → 995
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:239 → 585
    Atrophin-1; Atrophin-1 family

  4. XM_023623288.1 → XP_023479056.1  polyhomeotic-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Conserved Domains (2) summary
    cd09577
    Location:943 → 1011
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:239 → 585
    Atrophin-1; Atrophin-1 family

  5. XM_023623289.1 → XP_023479057.1  polyhomeotic-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Conserved Domains (2) summary
    cd09577
    Location:931 → 999
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:227 → 573
    Atrophin-1; Atrophin-1 family

  6. XM_023623291.1 → XP_023479059.1  polyhomeotic-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Conserved Domains (2) summary
    cd09577
    Location:931 → 999
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:227 → 573
    Atrophin-1; Atrophin-1 family

  7. XM_023623290.1 → XP_023479058.1  polyhomeotic-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2H5M2
    Conserved Domains (2) summary
    cd09577
    Location:931 → 999
    SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
    cl26464
    Location:227 → 573
    Atrophin-1; Atrophin-1 family

  8. XM_023623295.1 → XP_023479063.1  polyhomeotic-like protein 3 isoform X6

    UniProtKB/TrEMBL
    A0A5F5PTW5
    Conserved Domains (1) summary
    cl26464
    Location:239 → 585
    Atrophin-1; Atrophin-1 family

RNA

  1. XR_002801711.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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