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PLAA phospholipase A2 activating protein [ Equus caballus (horse) ]

Gene ID: 100053453, updated on 8-Mar-2024

Summary

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Official Symbol
PLAAprovided by VGNC
Official Full Name
phospholipase A2 activating proteinprovided by VGNC
Primary source
VGNC:VGNC:21521
See related
Ensembl:ENSECAG00000020120
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PLAA in Genome Data Viewer
Location:
chromosome: 23
Exon count:
14
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 23 NC_009166.3 (44438085..44476963, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 23 NC_009166.2 (44764208..44803355, complement)

Chromosome 23 - NC_009166.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111770191 Neighboring gene caspase activity and apoptosis inhibitor 1 Neighboring gene intraflagellar transport 74 Neighboring gene leucine rich repeat containing 19 Neighboring gene microRNA mir-872

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase A-2-activating protein
Names
phospholipase A-2-activating protein-like protein
phospholipase A-2-activating-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009166.3 Reference EquCab3.0 Primary Assembly

    Range
    44438085..44476963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001498176.6 → XP_001498226.2  phospholipase A-2-activating protein

    UniProtKB/TrEMBL
    F7CG24
    Related
    ENSECAP00000017568.3, ENSECAT00000021340.4
    Conserved Domains (6) summary
    COG2319
    Location:75 → 363
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:77 → 364
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam05831
    Location:365 → 419
    GAGE; GAGE protein
    pfam08324
    Location:604 → 857
    PUL; PUL domain
    pfam09070
    Location:413 → 525
    PFU; PFU (PLAA family ubiquitin binding)
    sd00039
    Location:135 → 177
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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