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Eif1ad6 eukaryotic translation initiation factor 1A domain containing 6 [ Mus musculus (house mouse) ]

Gene ID: 100042776, updated on 8-Feb-2024

Summary

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Official Symbol
Eif1ad6provided by MGI
Official Full Name
eukaryotic translation initiation factor 1A domain containing 6provided by MGI
Primary source
MGI:MGI:3782201
See related
Ensembl:ENSMUSG00000092019 AllianceGenome:MGI:3782201
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm4027
Summary
Predicted to enable ribosomal large subunit binding activity. Orthologous to human EIF1AY (eukaryotic translation initiation factor 1A Y-linked). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 1.8) and liver E18 (RPKM 0.1) See more
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Genomic context

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See Eif1ad6 in Genome Data Viewer
Location:
12 D2; 12 41.86 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (87664567..87669058)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (87617797..87622288)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene STARR-seq mESC enhancer starr_32892 Neighboring gene STARR-seq mESC enhancer starr_32893 Neighboring gene oogenesin 1 Neighboring gene STARR-seq mESC enhancer starr_32894 Neighboring gene GLE1 RNA export mediator pseudogene Neighboring gene ubiquitin-like 5B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
eukaryotic translation initiation factor 1A-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177564.1 → NP_001171035.1  eukaryotic translation initiation factor 1A-like 1

    See identical proteins and their annotated locations for NP_001171035.1

    Status: VALIDATED

    Source sequence(s)
    AC126554
    Consensus CDS
    CCDS49124.1
    UniProtKB/TrEMBL
    J3QMW5, Q3UT53
    Related
    ENSMUSP00000132993.2, ENSMUST00000164838.3
    Conserved Domains (1) summary
    PTZ00329
    Location:1 → 131
    PTZ00329; eukaryotic translation initiation factor 1A; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    87664567..87669058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011243969.1 → XP_011242271.1  eukaryotic translation initiation factor 1A-like 1 isoform X1

    See identical proteins and their annotated locations for XP_011242271.1

    UniProtKB/TrEMBL
    J3QMW5, Q3UT53
    Conserved Domains (1) summary
    PTZ00329
    Location:1 → 131
    PTZ00329; eukaryotic translation initiation factor 1A; Provisional
Nucleotide Protein
Heading Accession and Version

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