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gcnt2.2 glucosaminyl (N-acetyl) transferase 2 (I blood group), gene 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100038221, updated on 17-Aug-2024

Summary

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Official Symbol
gcnt2.2provided by Xenbase
Official Full Name
glucosaminyl (N-acetyl) transferase 2 (I blood group), gene 2provided by Xenbase
Primary source
Xenbase:XB-GENE-490633
See related
Ensembl:ENSXETG00000001072
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
ignt; ulg3; gcnt2; gcnt5; gcnt2c; nacgt1; nagct1; ba421m1.1; ba360o19.2
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Genomic context

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Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (90451979..90501456)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (84491288..84538981)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene tto transcription factor AP-2 alpha Neighboring gene uncharacterized LOC116411723 Neighboring gene glucosaminyl (N-acetyl) transferase 2 (I blood group) Neighboring gene PAK1 interacting protein 1 Neighboring gene transmembrane protein 14C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase
Names
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    90451979..90501456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002932669.4 → XP_002932715.2  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

    UniProtKB/TrEMBL
    A0A6I8SIL9, A0A8J0QMB5
    Related
    ENSXETP00000059086.2, ENSXETT00000065876.3
    Conserved Domains (1) summary
    pfam02485
    Location:97 → 354
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials