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hsd11b1l hydroxysteroid (11-beta) dehydrogenase 1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100037875, updated on 8-Mar-2024

Summary

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Official Symbol
hsd11b1lprovided by Xenbase
Official Full Name
hydroxysteroid (11-beta) dehydrogenase 1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-5851849
See related
Ensembl:ENSXETG00000014342
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
hsd3; 11-DH3; scdr10; hsd11b1l-a; hsd11b1l-b
Orthologs
human all
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Genomic context

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See hsd11b1l in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (114339394..114346694)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (102157655..102164955)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene SURP and G-patch domain containing 2 Neighboring gene mitochondrial contact site and cristae organizing system subunit 13 Neighboring gene CUGBP Elav-like family member 5 Neighboring gene nicalin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
hydroxysteroid 11-beta-dehydrogenase 1-like protein
Names
11-beta-HSD3
11-beta-hydroxysteroid dehydrogenase type 3
NP_001090784.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097315.1 → NP_001090784.1  hydroxysteroid 11-beta-dehydrogenase 1-like protein precursor

    See identical proteins and their annotated locations for NP_001090784.1

    Status: PROVISIONAL

    Source sequence(s)
    BC135167
    UniProtKB/Swiss-Prot
    A4IGM4
    Related
    ENSXETP00000031363.4, ENSXETT00000031363.5
    Conserved Domains (1) summary
    cd05332
    Location:30 → 277
    11beta-HSD1_like_SDR_c; 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    114339394..114346694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A4IGM4.1 GenPept UniProtKB/Swiss-Prot:A4IGM4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
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