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plpbp.L pyridoxal phosphate binding protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100037173, updated on 7-Sep-2023

Summary

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Official Symbol
plpbp.L
Official Full Name
pyridoxal phosphate binding protein L homeolog
Primary source
Xenbase:XB-GENE-6255245
Locus tag
XELAEV_18018501mg
See related
EnsemblRapid:ENSXLAG00005000838
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
prosc; prosc.L
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Genomic context

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See plpbp.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (126019977..126030647, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (110624903..110635699, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit L homeolog Neighboring gene adhesion G protein-coupled receptor A2 L homeolog Neighboring gene ER lipid raft associated 2 L homeolog Neighboring gene zinc finger protein 703 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
pyridoxal phosphate binding protein L homeolog
Names
proline synthetase co-transcribed homolog L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097867.1 → NP_001091336.1  pyridoxal phosphate binding protein L homeolog

    See identical proteins and their annotated locations for NP_001091336.1

    Status: PROVISIONAL

    Source sequence(s)
    BC129541
    UniProtKB/TrEMBL
    A0A974DD52, A2VD65
    Related
    ENSXLAP00005002487.1, ENSXLAT00005002533.1
    Conserved Domains (1) summary
    cd06822
    Location:9 → 240
    PLPDE_III_YBL036c_euk; Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Eukaryotic YBL036c-like proteins

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    126019977..126030647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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