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galm.L galactose mutarotase (aldose 1-epimerase) L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100036941, updated on 11-Apr-2024

Summary

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Official Symbol
galm.L
Official Full Name
galactose mutarotase (aldose 1-epimerase) L homeolog
Primary source
Xenbase:XB-GENE-1001029
Locus tag
XELAEV_18026646mg
See related
EnsemblRapid:ENSXLAG00005017157
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
galm
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Genomic context

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See galm.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (41517372..41566933)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (40353296..40402854)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene provisional ortholog of ADP dependent glucokinase L homeolog Neighboring gene heterogeneous nuclear ribonucleoprotein L like L homeolog Neighboring gene serine/arginine-rich splicing factor 7 L homeolog Neighboring gene gem nuclear organelle associated protein 6 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables aldose 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
  
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
  
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within galactose metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within glucose metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within hexose metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
galactose mutarotase (aldose 1-epimerase) L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097711.1 → NP_001091180.1  galactose mutarotase (aldose 1-epimerase) L homeolog

    See identical proteins and their annotated locations for NP_001091180.1

    Status: PROVISIONAL

    Source sequence(s)
    BC129693
    UniProtKB/TrEMBL
    A1L2T0
    Related
    ENSXLAP00005050627.1, ENSXLAT00005051774.1
    Conserved Domains (1) summary
    cd09019
    Location:26 → 339
    galactose_mutarotase_like; galactose mutarotase_like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    41517372..41566933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018261531.2 → XP_018117020.1  galactose mutarotase (aldose 1-epimerase) L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8G7Q7, A0A974HJ79

  2. XM_018261532.2 → XP_018117021.1  galactose mutarotase (aldose 1-epimerase) L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8G7Q7, A0A974HJ79

  3. XM_018261530.2 → XP_018117019.1  galactose mutarotase (aldose 1-epimerase) L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8G7Q7, A0A974HJ79
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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