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LOC100036845 uncharacterized LOC100036845 [ Xenopus laevis (African clawed frog) ]

Gene ID: 100036845, updated on 18-Aug-2023

Summary

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Gene symbol
LOC100036845
Gene description
uncharacterized LOC100036845
Locus tag
XELAEV_18036690mg
See related
EnsemblRapid:ENSXLAG00005021348
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See LOC100036845 in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
36
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (3893074..3926669)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (3959068..3993025)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase alpha-4-like Neighboring gene ovostatin-like Neighboring gene uncharacterized LOC108697327 Neighboring gene ovostatin homolog Neighboring gene ovostatin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Ovostatin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097133.1 → NP_001090602.1  Ovostatin-like precursor

    See identical proteins and their annotated locations for NP_001090602.1

    Status: PROVISIONAL

    Source sequence(s)
    BC129064
    UniProtKB/TrEMBL
    A0A974H9Z2, A1L1H6
    Related
    ENSXLAP00005062752.1, ENSXLAT00005064205.1
    Conserved Domains (7) summary
    COG2373
    Location:126 → 1068
    YfaS; Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family [General function prediction only]
    pfam00207
    Location:735 → 826
    A2M; Alpha-2-macroglobulin family
    pfam01835
    Location:125 → 218
    A2M_N; MG2 domain
    pfam07677
    Location:1365 → 1449
    A2M_recep; A-macroglobulin receptor
    pfam07678
    Location:1006 → 1254
    A2M_comp; A-macroglobulin complement component
    pfam07703
    Location:464 → 602
    A2M_N_2; Alpha-2-macroglobulin family N-terminal region
    cl08267
    Location:955 → 1253
    ISOPREN_C2_like; This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    3893074..3926669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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