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RBM8A RNA binding motif protein 8A [ Equus caballus (horse) ]

Gene ID: 100034052, updated on 17-Aug-2024

Summary

Official Symbol
RBM8Aprovided by VGNC
Official Full Name
RNA binding motif protein 8Aprovided by VGNC
Primary source
VGNC:VGNC:22252
See related
Ensembl:ENSECAG00000022024
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
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Genomic context

See RBM8A in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (44489302..44491100)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene RNA polymerase III subunit GL Neighboring gene ankyrin repeat domain 34A Neighboring gene limb and CNS expressed 1 like Neighboring gene serine/threonine-protein kinase VRK1 pseudogene Neighboring gene gonadotropin releasing hormone receptor 2 Neighboring gene peroxisomal biogenesis factor 11 beta

Genomic regions, transcripts, and products

Genomic Sequence:
NC_009148.3 Chromosome 5 Reference EquCab3.0 Primary Assembly

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of exon-exon junction complex IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
RNA-binding protein 8A
Names
RNA binding motif protein 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163973.1NP_001157445.1  RNA-binding protein 8A

    See identical proteins and their annotated locations for NP_001157445.1

    Status: PROVISIONAL

    Source sequence(s)
    PJAA01000006
    UniProtKB/TrEMBL
    F6XEW8
    Related
    ENSECAP00000019548.2, ENSECAT00000023591.3
    Conserved Domains (1) summary
    cd12324
    Location:67151
    RRM_RBM8; RNA recognition motif (RRM) found in RNA-binding protein RBM8A, RBM8B nd similar proteins

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    44489302..44491100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005609925.3XP_005609982.1  RNA-binding protein 8A isoform X1

    See identical proteins and their annotated locations for XP_005609982.1

    Conserved Domains (1) summary
    cd12324
    Location:66150
    RRM_RBM8; RNA recognition motif (RRM) found in RNA-binding protein RBM8A, RBM8B nd similar proteins