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GPCPD1 glycerophosphocholine phosphodiesterase 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100033295, updated on 6-Jun-2024

Summary

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Gene symbol
GPCPD1
Gene description
glycerophosphocholine phosphodiesterase 1
See related
EnsemblRapid:ENSMODG00000003735
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See GPCPD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (631314724..631423895)
103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (621727654..621791152)

Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 6 non-catalytic subunit Neighboring gene chromogranin B Neighboring gene shieldin complex subunit 1 Neighboring gene uncharacterized LOC103092236 Neighboring gene ubiquilin-4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerophosphocholine phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphocholine phosphodiesterase GPCPD1
Names
glycerophosphocholine phosphodiesterase GDE1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077227.1 Reference mMonDom1.pri

    Range
    631314724..631423895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056823515.1 → XP_056679493.1  glycerophosphocholine phosphodiesterase GPCPD1 isoform X2

    UniProtKB/TrEMBL
    F7EW19
    Related
    ENSMODP00000062254.1, ENSMODT00000098480.1

  2. XM_056823518.1 → XP_056679496.1  glycerophosphocholine phosphodiesterase GPCPD1 isoform X2

    UniProtKB/TrEMBL
    F7EW19

  3. XM_056823508.1 → XP_056679486.1  glycerophosphocholine phosphodiesterase GPCPD1 isoform X1

    UniProtKB/TrEMBL
    F7EW19
    Related
    ENSMODP00000081720.1, ENSMODT00000153163.1

  4. XM_056823525.1 → XP_056679503.1  glycerophosphocholine phosphodiesterase GPCPD1 isoform X3

    UniProtKB/TrEMBL
    F7EW19

  5. XM_056823528.1 → XP_056679506.1  glycerophosphocholine phosphodiesterase GPCPD1 isoform X4

    UniProtKB/TrEMBL
    F7EW19

RNA

  1. XR_008917633.1 RNA Sequence

  2. XR_008917634.1 RNA Sequence

  3. XR_008917638.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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