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EBF1 EBF transcription factor 1 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100030230, updated on 8-May-2024

Summary

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Gene symbol
EBF1
Gene description
EBF transcription factor 1
See related
EnsemblRapid:ENSMODG00000008198
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See EBF1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (360750539..361202546, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (353948577..354400370, complement)

Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein P1-like Neighboring gene U2 spliceosomal RNA Neighboring gene stress-70 protein, mitochondrial-like Neighboring gene ring finger protein 145 Neighboring gene ubiquitin like domain containing CTD phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor COE1
Names
early B cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077227.1 Reference mMonDom1.pri

    Range
    360750539..361202546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056811532.1 → XP_056667510.1  transcription factor COE1 isoform X4

    Related
    ENSMODP00000043809.1, ENSMODT00000084633.2

  2. XM_056811529.1 → XP_056667507.1  transcription factor COE1 isoform X1

  3. XM_056811530.1 → XP_056667508.1  transcription factor COE1 isoform X2

  4. XM_056811531.1 → XP_056667509.1  transcription factor COE1 isoform X3

    Related
    ENSMODP00000010194.3, ENSMODT00000010390.5

  5. XM_056811533.1 → XP_056667511.1  transcription factor COE1 isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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