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VPS11 VPS11 core subunit of CORVET and HOPS complexes [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100024739, updated on 8-May-2024

Summary

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Gene symbol
VPS11
Gene description
VPS11 core subunit of CORVET and HOPS complexes
See related
EnsemblRapid:ENSMODG00000013300
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 4 NC_077230.1 (231274791..231290982, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 4 NC_008804.1 (230886253..230899973, complement)

Chromosome 4 - NC_077230.1Genomic Context describing neighboring genes Neighboring gene H2A histone family, member X Neighboring gene hydroxymethylbilane synthase Neighboring gene hypoxia up-regulated 1 Neighboring gene uncharacterized LOC103100547 Neighboring gene solute carrier family 37 member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in organelle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuole organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HOPS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 11 homolog
Names
VPS11, CORVET/HOPS core subunit
vacuolar protein sorting 11 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077230.1 Reference mMonDom1.pri

    Range
    231274791..231290982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056794247.1 → XP_056650225.1  vacuolar protein sorting-associated protein 11 homolog

    UniProtKB/TrEMBL
    F6ZJC0
    Related
    ENSMODP00000016636.4, ENSMODT00000016941.5
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials