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CDH7 cadherin 7 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100014686, updated on 8-May-2024

Summary

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Gene symbol
CDH7
Gene description
cadherin 7
See related
EnsemblRapid:ENSMODG00000021410
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See CDH7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (250099984..250293351, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (285959446..286143803)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene cadherin 19 Neighboring gene U6 snRNA-associated Sm-like protein LSm6 Neighboring gene uncharacterized LOC103105043 Neighboring gene uncharacterized LOC130458377 Neighboring gene ran-specific GTPase-activating protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-7
Names
cadherin 7, type 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    250099984..250293351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001365629.4 → XP_001365666.1  cadherin-7

    See identical proteins and their annotated locations for XP_001365666.1

    UniProtKB/TrEMBL
    A0A5F8GI78, F7CBX9
    Conserved Domains (3) summary
    cd11304
    Location:157 → 258
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:73 → 151
    CA; Cadherin repeats
    pfam01049
    Location:639 → 777
    Cadherin_C; Cadherin cytoplasmic region

  2. XM_016431702.2 → XP_016287188.1  cadherin-7

    UniProtKB/TrEMBL
    A0A5F8GI78, F7CBX9
    Related
    ENSMODP00000026746.2, ENSMODT00000027227.5
    Conserved Domains (3) summary
    cd11304
    Location:157 → 258
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:73 → 151
    CA; Cadherin repeats
    pfam01049
    Location:639 → 777
    Cadherin_C; Cadherin cytoplasmic region
Nucleotide Protein
Heading Accession and Version

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