nsv833860
- Organism: Homo sapiens
- Study:nstd68 (Wong et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:132,107
- Publication(s):Wong et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 469 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 469 SVs from 57 studies. See in: genome view
Overlapping variant regions from other studies: 14 SVs from 2 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv833860 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 49,286,685 | 49,418,791 |
| nsv833860 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 49,789,942 | 49,922,048 |
| nsv833860 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000019.8 | Chr19 | 54,481,754 | 54,613,860 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1454789 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1454789 | Remapped | Perfect | NC_000019.10:g.(49 286685_?)_(?_49418 791)del | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 49,286,685 | 49,418,791 |
| nssv1454789 | Remapped | Perfect | NC_000019.9:g.(497 89942_?)_(?_499220 48)del | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 49,789,942 | 49,922,048 |
| nssv1454789 | Submitted genomic | NC_000019.8:g.(544 81754_?)_(?_546138 60)del | NCBI35 (hg17) | NC_000019.8 | Chr19 | 54,481,754 | 54,613,860 |