nsv7096067
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:124
- Description:NC_000020.10:g.(?_13775474)_(13775597_?)del AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 78 SVs from 14 studies. See in: genome view
Overlapping variant regions from other studies: 78 SVs from 14 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv7096067 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000020.11 | Chr20 | 13,794,828 | 13,794,951 |
nsv7096067 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000020.10 | Chr20 | 13,775,474 | 13,775,597 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv18787636 | deletion | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV003122638.2, VCV002426805.2 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv18787636 | Remapped | Perfect | NC_000020.11:g.(?_ 13794828)_(1379495 1_?)del | GRCh38.p12 | First Pass | NC_000020.11 | Chr20 | 13,794,828 | 13,794,951 |
nssv18787636 | Submitted genomic | NC_000020.10:g.(?_ 13775474)_(1377559 7_?)del | GRCh37 (hg19) | NC_000020.10 | Chr20 | 13,775,474 | 13,775,597 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv18787636 | GRCh37: NC_000020.10:g.(?_13775474)_(13775597_?)del | deletion | germline | not provided | Pathogenic | ClinVar | RCV003122638.2, VCV002426805.2 |